Tumor classification from DNA methylation profiles (CUP)

Internship supervision, CRCT, IRIT, 2024

Co-supervision of an MSc Data Science internship at CRCT (Apr. 2024 – Sep. 2024), in collaboration with IRIT.

Goal: develop an AI classifier for tumor classification based on DNA methylation profiles, with application to CUP syndromes (Cancer of Unknown Primary).

Key points

  • Data: methylation profiles (high-dimensional biological data).
  • Work: preprocessing + model training + evaluation/validation.
  • Deliverables: reproducible pipeline and results report.